Thursday 25 June 2015

South Kashmir is in Flood Alert

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Flood alert has been declared for Anantnag and Pulwama district of South Kashmir as river Jhelum was flowing close to danger mark at Sangam.

According to PTI, the Chief Engineer,
Irrigation and Flood Control Department, Javed Jaffer said,
 
"Flood alert has been declared for Anatnag and Pulwama districts as river Jhelum is flowing at 22 feet at Sangam, one feet below the danger mark,".

People living in and around flood prone areas in these districts have been advised to shift to safer areas.

The water level in Jhelum and its tributaries rose sharply following heavy rainfall since early on Wednesday.
The weatherman has forecast more rains over the next 48 hours in Kashmir.

Tuesday 23 June 2015

Heatwave in Pakistan's Sindh killed 224 people

Some 224 people are now believed to have died during a heatwave in Pakistan's southern Sindh province.
Health officials say most of the deaths have been in the largest city, Karachi, which has experienced temperatures as high as 45C (113F) in recent days. 

The city has seen power cuts caused by an increased demand for electricity because of the extreme weather.
Many of the victims are elderly people who have been suffering from fever, dehydration and gastric problems. 

Hundreds of patients suffering from the effects of the heatwave are being treated at government hospitals, provincial health secretary Saeed Mangnejo said.
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Local media report that more than 150 bodies have been taken since Saturday to the Edhi morgue in Sohrab Goth, which usually receives about 20 bodies a day.

The demand for electricity for air conditioning has coincided with increased power needs over Ramadan, when Muslims fast during daylight hours.

Hot weather is not unusual during summer months in Pakistan, but prolonged power outages seem to have made matters worse, the BBC's Shahzeb Jillani reports.

Sporadic angry protests have taken place in parts of the city, with some people blaming the government and the city's main power utility, K-Electric, for failing to avoid deaths, our correspondent says.

Source: BBC News

Monday 22 June 2015

Crocodiles rocked pre-Amazonian Peru: Seven crocodile species found in single 13-million-year-old bone bed

 

Thirteen million years ago, as many as seven different species of crocodiles hunted in the swampy waters of what is now northeastern Peru, new research shows. This hyperdiverse assemblage, revealed through more than a decade of work in Amazon bone beds, contains the largest number of crocodile species co-existing in one place at any time in Earth's history, likely due to an abundant food source that forms only a small part of modern crocodile diets: mollusks like clams and snails. The work, published today in the journal Proceedings of the Royal Society B, helps fill in gaps in understanding the history of the Amazon's remarkably rich biodiversity.

"The modern Amazon River basin contains the world's richest biota, but the origins of this extraordinary diversity are really poorly understood," said John Flynn, Frick Curator of Fossil Mammals at the American Museum of Natural History and an author on the paper. "Because it's a vast rain forest today, our exposure to rocks--and therefore, also to the fossils those rocks may preserve--is extremely limited. So anytime you get a special window like these fossilized "mega-wetland" deposits, with so many new and peculiar species, it can provide novel insights into ancient ecosystems. And what we've found isn't necessarily what you would expect."

Before the Amazon basin had its river, which formed about 10.5 million years ago, it contained a massive wetland system, filled with lakes, embayments, swamps, and rivers that drained northward toward the Caribbean, instead of today's pattern of eastward river flow to the Atlantic Ocean. Knowing the kind of life that existed at that time is crucial to understanding the history and origins of modern Amazonian biodiversity. But although invertebrates like mollusks and crustaceans are abundant in Amazonian fossil deposits, evidence of vertebrates other than fish have been very rare.

Since 2002, Flynn has been co-leading prospecting and excavating expeditions with colleagues at fossil outcrops of the Pebas Formation in northeastern Peru. These outcrops have preserved life from the Miocene, including the seven species of crocodiles discussed in Proceedings B. Three of the species are entirely new to science, the strangest of which is Gnatusuchus pebasensis, a short-faced caiman with globular teeth that is thought to have used its snout to "shovel" mud bottoms, digging for clams and other mollusks. The new work suggests that the rise of Gnatusuchus and other "durophagous," or shell-crunching, crocodiles is correlated with a peak in mollusk diversity and numbers, which disappeared when the mega-wetlands transformed into the modern Amazon River drainage system.

"When we analyzed Gnatusuchus bones and realized that it was probably a head-burrowing and shoveling caiman preying on mollusks living in muddy river and swamp bottoms, we knew it was a milestone for understanding proto-Amazonian wetland feeding dynamics," said Rodolfo Salas-Gismondi, lead author of the paper and a graduate student at the University of Montpellier, in France, as well as researcher and chief of the paleontology department at the National University of San Marcos' Museum of Natural History in Lima, Peru.

Besides the blunt-snouted crocodiles like Gnatusuchus, the researchers also recovered the first unambiguous fossil representative of the living smooth-fronted caiman Paleosuchus, which has a longer and higher snout shape suitable for catching a variety of prey, like fish and other active swimming vertebrates.

"We uncovered this special moment in time when the ancient mega-wetland ecosystem reached its peak in size and complexity, just before its demise and the start of the modern Amazon River system," Salas-Gismondi said. "At this moment, most known caiman groups co-existed: ancient lineages bearing unusual blunt snouts and globular teeth along with those more generalized feeders representing the beginning of what was to come."

The new research suggests that with the inception of the Amazon River System, mollusk populations declined and durophagous crocodile species went extinct as caimans with a broader palate diversified into the generalist feeders that dominate modern Amazonian ecosystems. Today, six species of caimans live in the whole Amazon basin, although only three ever co-exist in the same area and they rarely share the same habitats. This is in large contrast to their ancient relatives, the seven diverse species that lived together in the same place and time.

This story is taken from Science Daily

Underground ants can't take the heat

Underground species of army ants are much less tolerant of high temperatures than their aboveground relatives -- and that difference in thermal tolerance could mean that many climate change models lack a key element of how animal physiology could affect responses to changing environments. 

According to a new study from Drexel University, underground species of army ants are much less tolerant of high temperatures than their aboveground relatives--and that difference in thermal tolerance could mean that many climate change models lack a key element of how animal physiology could affect responses to changing environments.

At face value, this is not surprising, noted Sean O'Donnell, PhD, a professor in Drexel's College of Arts and Sciences and senior author of the study published in the Journal of Animal Ecology. Ants that live above ground are exposed to higher temperatures than subterranean ants, so they should be expected to tolerate hotter conditions--but the relationship between microhabitat and heat tolerance simply hadn't been tested before. No one knew whether the subterranean ant species might have been capable of handling high temperatures, even if they prefer cooler ones.

Current models of climate change are built on predictions that animal species may shift their geographic ranges to new latitudes or elevations when the temperature rises. But these models typically use temperature averages taken at a macro resolution--commonly measured 1 meter above ground, and encompassing areas of a square kilometer or more--and they don't generally take into account that different species have varied levels of heat tolerance.

"A few inches of soil can make a big difference in temperature," said Kaitlin Baudier, a doctoral student in O'Donnell's lab and lead author of the study.
 
To look at whether factors like microhabitat preference--living above ground vs. below ground--affected an animal's thermal range, Baudier, O'Donnell and colleagues looked at nine closely related species of army ants that lived in the same general area in Costa Rica's tropical forests. They sampled ants from each of the species and experimentally tested their maximum heat tolerance in the lab.

They found that the best predictor of heat tolerance was how active the ant species was in above-ground environments. Above-ground army ants were most tolerant of higher temperatures, while species that lived mostly below-ground had much lower tolerance to heat, and species that used a combination of above- and below-ground environments had intermediate levels of tolerance.

Body size and habitat type also interacted, so that in comparisons of same-size individuals from different species, the species that are active above-ground were more heat tolerant--another indicator that habitat use signals the species' tolerance to heat. Within each species, smaller ants were more sensitive to rising temperatures than the larger ants of the same type.

"The takeaway message is that an animal's adaptation to its microhabitat is relevant to its thermal physiology," said Baudier.

"This shows us that the ways these species respond to a changing climate will be different depending on habitat type, and it's important to know that microhabitat could be an indicator of heat tolerance," O'Donnell said.

This story is taken from Science Daily

Vagrant bachelors could save rare bird

A study has revealed the importance of single males in small, threatened populations. Results from a study of endangered New Zealand hihi birds shows that bachelor males who don't hold breeding territories, known as 'floaters,' could help maintain genetic diversity and decrease the likelihood of inbreeding by sneakily fathering chicks. 

These underestimated individuals are vital to the long-term survival of small populations, such as in the hihi, a rare bird found only in New Zealand. There are thought to be only 2,000 individuals left in the wild, making them extremely vulnerable to natural disasters or disease, of which a single severe incident could wipe out the whole species.

While floaters have much lower breeding success rates than coupled males, in hihis they are able coerce females, which are already coupled up, into mating. This has been shown to have a small but significant impact on population size by increasing the number of breeding birds, as well as influencing the sex ratio. These factors are important in maintaining genetic diversity and decreasing levels of inbreeding.

Dr Patricia Brekke, researcher at ZSL and the lead author of the study, said: "Conservation management often discounts individuals that are thought to be unable to produce offspring, thinking that they have no effect on populations. We have shown that in hihi, floaters are able to reproduce and pass on their genes from one generation to the next, which helps with long-term survival of this endangered bird.
 
"Despite being difficult to study, as they have no fixed abode, we should pay more attention to these bachelor males as they can potentially have a big effect on genetic diversity and therefore the survival of species with very few individuals remaining. Not taking floating individuals into account can undermine our conservation efforts."

The hihi is one of the world's most evolutionarily unique birds, classed as the only member of its own family, and were lost from New Zealand's North Island by around 1895 because of introduced predators such as rats, habitat loss due to farming and disease. They are the only bird species in the world to mate face-to-face like humans.

Floating behaviour has been observed in a variety of animals including fish, mammals and insects. Floating can be a successful breeding strategy as bachelor males avoid investing their energy into defending territory and looking after chicks, instead spending time searching for mates. In hihi birds, floaters tend to be either younger males (around a year old) that are inexperienced at holding a territory or older males (over five years) who lack the energy to defend territory. Their 'homelessness' makes them difficult to study as they travel between different areas looking for food and potential mates.

Conservation efforts to save the species began in the 1980s and involves reintroducing birds to different islands and mainland reserves. ZSL has so far been involved in establishing three reintroduced populations, but these are all small (less than 150 birds each) and so hihi remain in a precarious situation.

This story is taken from Science Daily

Tiger-spray DNA shown as valuable conservation tool

Scientists have demonstrated a new technique to non-invasively survey tigers using their scent sprays, which are detected much more frequently in the wild than scat--the 'breadcrumb' that researchers have traditionally used to track the endangered animals. The findings show that DNA taken from tiger spray is just as good or even better than scat in identifying individual tigers and their gender, and have the potential to increase the power of conservation surveys and management. 

"Genetic monitoring of tiger source populations is a conservation priority," said Anthony Caragiulo, a postdoctoral researcher in the American Museum of Natural History's Sackler Institute for Comparative Genomics. "The utility of this new method is really impactful because it will let us dramatically build upon the number of tigers that can be surveyed and, consequently, increase our understanding of these elusive animals--hopefully before they are gone."

Despite intense conservation efforts, there are fewer than 3,200 tigers (Panthera tigris) in the wild, living in less than seven percent of their historical range. When a population is confined to small islands of wilderness, as are tigers, there is a higher risk of inbreeding and loss of genetic diversity, leaving the species with weaker young. To combat this, the Museum has been working with the global wild-cat conservation organization Panthera to establish "genetic corridors" that allow tigers to seek new territory for prey and new populations for breeding. "Tracking" individual cats using genetic markers lets researchers map movement within and between populations.

Genetic tracking has traditionally relied on extracting DNA from scat collected in the wild. But in humid, tropical landscapes--like those in Sumatra, where a number of tigers live--scat often degrades before researchers can find it. Scent sprays left by tigers on trees and overhanging leaves degrade less quickly, and can be detected by researchers between two and eight times as frequently as scat. So, to boost the effectiveness of genetic monitoring of tigers in warm regions, the research team questioned whether DNA could be extracted from sprays.

The researchers collected spray samples from three captive tigers in Ontario with cotton swabs that were then stored in tubes of buffer to help preserve the DNA. Tiger spray is a combination of anal gland secretions--said, surprisingly, to have a floral scent like citrus--and urine, which contains DNA in the form of cells from the urethra. The researchers were able to amplify microsatellite loci, which are noncoding DNA sequences with unique numbers of repeated nucleotides providing enough information to "fingerprint" individual tigers, and portions of the sex chromosome to determine whether they are male or female.

"We recently spent weeks looking for tiger scat in the field with very little luck," said Rob Pickles, monitoring specialist for Panthera. "Although this new spray technique wouldn't replace scat studies entirely, we now know that we can use both methods in conjunction to drastically increase our monitoring abilities."

The next step for the researchers is to test the technique in the field, where it also could be used to monitor other scent-spraying animals, like lions.


This Story is taken from Science Daily

West Bengal Govt. want to relocate forest villages to increases the number of Bengal Tiger in BUXA TIGER RESERVE

In Buxa Tiger Reserve, you can find a village inside the forest within every 5 kms. This human habitat inside the Buxa Tiger Reserve create great opportunities for the timber mafias and the poachers.

Timber mafias and poachers give a little money to the local villagers and use them as a guide to enter the core areas. this increases the Wildlife crime inside the Buxa region rapidly.
The Govt. and the Forest ministry now looking to end or decrease this Wildlife crime by relocate the villagers. 

According to the Govt. report there are 13 villages inside the Buxa core region (unofficially the number exceeded 20) with more than thousand people who are living in those villages. Their main source of income is wood cutting, farming and dairy. For their livelihood very often they enters the core areas.

This trespassing inside the core zone makes a uncomfortable environment for the Bengal Tigers to breed. The West Bengal Govt. is criticized not only from the Wildlife NGOs but also from the Central Govt. because for a lot time no Bengal Tiger is seen in the Buxa Tiger region but the Bengal Govt claims that there are at least 6 Bengal tiger lived inside the Buxa Tiger Reserve.

The Govt. want to relocate the villagers outside the the core area beside the 31st National Highway.

Source: Ei Samay

Sunday 21 June 2015

Genetic ancestry of tigers explored

A 10-year study looked at DNA similarities of tigers -- living and extinct -- in order to better understand these animals as well as provide a new, more powerful tool for wildlife protection.

study, which is published online in the Journal of Heredity and will appear in the print edition May 1, 2015 describes DNA signatures for 145 individual tigers, including "voucher specimens" of tigers from verified geographic origins including Eurasian museum specimens that represented extinct subspecies
Tigers -- they are some of nature's most beautiful, deadly and endangered species. In fact, living tigers are severely endangered in fragmented geographic areas across Asia -- some reports show their numbers as low as 3,000 wild individuals. While there are efforts to help protect these magnificent creatures, more was needed in terms of research into the genetics of tigers.
 
The study's first results appeared in 2004 that showed Malayan tigers splitting from its Indochinese counterpart as a distinct, new fifth-living tiger subspecies. The latest results show that extinct Javan (1980s) and Bali (1940s) tigers were nearly indistinguishable from a molecular standpoint from Sumatran tigers just as the extinct Caspian tigers are nearly identical to surviving Amur tiger subspecies.

Source: Science Daily

Habitat loss threatens the world's felids

Almost half of the 36 species of felids that live in the wild in the world are at threat, according to scientists. Yet the lack of studies regarding their main threat, the loss and fragmentation of their habitat, limits the establishment of effective conservation strategies. These are the findings of a study which has only been able to find 162 scientific articles regarding this threat which clearly endangers the Iberian lynx. 
 http://gifts.worldwildlife.org/gift-center/Images/large-species-photo/large-Lynx-photo.jpg
Despite conservation efforts, news on how Iberian lynx (Lynx pardinus) are hit by vehicles on Spanish roads has been reported. The status of the most endangered felid in the world is hardly improved by the continual 'incursions' into its territory.. Ever-shrinking and broken-up habitats affect the future of the lynx.

To assess the situation of the Iberian lynx and other felid species that live in the wild on our planet, a team of Brazilian and Spanish scientists has reviewed the scientific literature that exists on the main threat for these mammals: the loss and fragmentation of their habitats. The results have been published in the scientific journal Oryx. Although many scientific studies are produced (last January, for example, 60,000 scientific articles were published), researchers could only find a total of 162 studies which evaluated threats affecting felids.

North America and Europe generate the greatest amount of research on the effect of habitat loss on felids. However, in view of the lack of research in certain countries with less economic resources, the real effect of this threat is still unknown for 16 species of felids. This is the case for the Andean mountain cat (Leopardus jacobita), the Bornean bay cat (Pardofelis badia), the flat-headed cat (Prionailurus planiceps), and the fishing cat (Prionailurus viverrinus), in danger of extinction and for whom there are very few studies and conservation measures.

Source: Science Daily

lower-oxygen oceans will shift marine habitats

Warming temperatures and decreasing levels of dissolved oxygen will act together to create metabolic stress for marine animals. Habitats will shift to places in the ocean where the oxygen supply can meet the animals' increasing future needs. 
 
University of Washington researchers and collaborators have found that the same principle will apply to marine species under global warming. The warmer water temperatures will speed up the animals' metabolic need for oxygen, as also happens during exercise, but the warmer water will hold less of the oxygen needed to fuel their bodies, similar to what happens at high altitudes.

The study, published June 5 in Science, finds that these changes will act together to push marine animals away from the equator. About two thirds of the respiratory stress due to climate change is caused by warmer temperatures, while the rest is because warmer water holds less dissolved gases.

The study centered on four Atlantic Ocean species whose temperature and oxygen requirements are well known from lab tests: Atlantic cod that live in the open ocean; Atlantic rock crab that live in coastal waters; sharp snout seabream that live in the subtropical Atlantic and Mediterranean; and common eelpout, a bottom-dwelling fish that lives in shallow waters in high northern latitudes.

Deutsch used climate models to see how the projected temperature and oxygen levels by 2100 due to climate change would affect these four species' ability to meet their future energy needs. If current emissions continue, the near-surface ocean is projected to warm by several degrees Celsius by the end of this century. Seawater at that temperature would hold 5-10 percent less oxygen than it does now.

Results show future rock crab habitat would be restricted to shallower water, hugging the more oxygenated surface. For all four species, the equator-ward part of the range would become uninhabitable because peak oxygen demand would become greater than the supply. Viable habitats would shift away from the equator, displacing from 14 percent to 26 percent of the current ranges.

The four animals were chosen because the effects of oxygen and temperature on their metabolism are well known, and because they live in diverse habitats. The authors believe the results are relevant for all marine species that rely on aquatic oxygen for an energy source.

Previously, marine scientists thought about oxygen more in terms of extreme events that could cause regional die-offs of marine animals, also known as dead zones.

Source: Science Daily

Burmese rock python found in North Bengal

A rare python was today spotted at Haldibari Tea estate in Dooars area of Alipurduar district, a forest official said.
http://afewofmyfavoritethings.info/wp-content/uploads/2013/11/Burmese_python112.jpg

The 15 ft 'Burmese rock python', which is a rare species, was spotted in a nullah within the plantation area, Wildlife Ranger, Binnaguri, Dilip Das Chowdhury said.

The reptile was later released in nearby jungle, he said.
Burmese Python photo _73659540_z7800037-burmese_python-spl_zps94e35733.jpg

Saturday 20 June 2015

Fossil of huge 'walking' bat discovered in New Zealand

The new species, Mystacina miocenalis, was described today in the journal PLOS ONE, and is related to another bat, Mystacina tuberculata, which still lives in New Zealand's old growth forests.
Mystacina tuberculata foraging on South Island, New Zealand.

The fossils were found near Central Otago on South Island, in sediment left over from a vast prehistoric body of water known as Lake Manuherikia, which was part of warmer subtropical rainforest during the early Miocene era, between 16 and 19-million-years-ago.

Bats, belonging to the Mystacina genus, were believed to have an ancient history in New Zealand, but until now, the oldest fossil of a Mystacina bat in New Zealand was from a cave in South Island, dating to 17,500 years ago. This latest discovery forces a rethink of when these peculiar, walking bats first crossed the ditch, arriving from what is present-day Australia.

The new species has similar teeth to its contemporary relative, suggesting a broad diet that included nectar, pollen and fruit, as well as insects and spiders. Limb bones found in the deposit also showed similar structures specialised for walking.

Where they differ is body size: at an estimated 40 grams, the fossil bat is roughly three times heavier than its living cousin, and the average weight of more than 900 living bat species.

The research team also found a diverse array of plant, animal and insect fossils at the site, which shows that the 16-million-year-old subtropical ecosystem bore resemblance to the more temperate one that exists today.

Source: Science Daily

Staying cool: Saharan silver ants' heat-deflecting adaptations

Researchers have discovered two strategies that enable Saharan silver ants to stay cool in one of the world's hottest environments. They are the first to demonstrate that the ants use a coat of uniquely shaped hairs to control electromagnetic waves over an extremely broad range from the solar spectrum to the thermal radiation spectrum and that different physical mechanisms are used in different spectral bands to realize the same biological function of reducing body temperature. 
 
 
Source: Science Daily

Nine whales appear to have died at the same time, in Alaska

At least nine fin whales have been discovered floating dead in waters from Kodiak to Unimak Pass since late May. 'It is an unusual and mysterious event that appears to have happened around Memorial Day weekend,' said marine mammal specialist Kate Wynne. 'We rarely see more than one fin whale carcass every couple of years.' 
The first of several dead fin whales, later named FW01, floats outside Marmot Bay on May 23

On May 23, Wynne received a message from National Oceanic and Atmospheric Administration enforcement officers that crew members on the Alaska Marine Highway System's ferry MV Kennicott had photographed dead whales. During the next two weeks, boaters, fishermen and pilots reported floating dead whales in the area. Based on photos submitted with these reports, Wynne and her NOAA collaborators determined that at least nine fin whales died in a relatively small area. The dead whales are now drifting along both sides of Kodiak Island.

'It is really perplexing for a number of reasons,' Wynne said. 'They appear to have all died around the same time. And the strange thing is they are all one species, with the exception of one dead humpback whale found in a different location.'

'So part of the mystery is why just fin whales? Why not their prey? Why are there not other consumers in the system showing up in mass die-off mode?' said Wynne.

Fin whales, an endangered species, grow to 70 feet long and they feed in tight formations, so Wynne thinks the dead whales could have consumed something toxic around the week of May 20.

Only two carcasses have come ashore. Wynne and fellow marine mammal specialist Bree Witteveen were able to take samples from one. The whale had been dead and floating in the water for a week. Samples were sent to a lab for biotoxin analysis.

Source: Science Daily

Ancient DNA extracted from extinct Giant kangaroos

A team of scientists led by Dr Bastien Llamas and Professor Alan Cooper from the University of Adelaide's Australian Centre for Ancient DNA (ACAD) have extracted DNA sequences from two species: a giant short-faced kangaroo (Simosthenurus occidentalis) and a giant wallaby (Protemnodon anak). These specimens died around 45,000 years ago and their remains were discovered in a cold and dry cave in Tasmania.
Dr Bastien Llamas with a skull of an extinct short-faced kangaroo (Simosthenurus occidentalis)

From the out come of this research work it is found that the extinct giant wallabies are very close relatives of large living kangaroos, such as the red and western grey kangaroos. Their skeletons had suggested they were quite primitive macropods─a group that includes kangaroos, wallabies, pademelons and quokka.

The research has also confirmed that short-faced kangaroos are a highly distinct lineage of macropods, which had been predicted on their unusual anatomy.

In addition to poor DNA preservation, most of the extinct Australian megafauna do not have very close relatives roaming around today, which makes it more difficult to retrieve and interpret the genetic data.

Although ancient DNA confirms that the short-faced kangaroos left no descendants, it also shows their closest living cousin could be the banded hare-wallaby (Lagostrophus fasciatus), which is now restricted to small isolated islands off the coast of Western Australia.

The research is published online (ahead of print) in Molecular Biology and Evolution.

Source: Science Daily

Kangaroos Are Lefties

Just like humans, kangaroos prefer to use one of their hands over the other for every tasks.

Recently a research work published in the Journal Current Biology which conclude this characteristic of the kangaroos
Red necked wallaby 
According to Yegor Malashichev of Saint Petersburg State University in Russia, the main researcher of this work, just like human, kangaroos prefer one of their hands over the other for every task. Though one thing is different between the human and the kangaroos - most of the humans prefers right hand where most of the kangaroos use left hand. 

Malashichev believes that this work will help a lot in the evolutionary biology.

Source: Science Daily

Friday 19 June 2015

Habitat Loss is the Biggest Threat to West Bengal State Animals

The Fishing cat, Bengal's state animal once common in the wetlands of Howrah and Hoogly, is staring at an uncertain future due to rapid habitat destruction for agriculture activities and industries. A recent study revealed the animal, declared 'endangered' in the IUCN red list , may have become locally extinct in Hoogly.
http://www.konicaminolta.com/kids/endangered_animals/library/field/img/fishing-cat_img01-l.jpg
A study conducted by a city-based wildlife biologist between January and June 2014 over more than 14000sq km in Howrah also said that some of the last remaining patches of ideal fishing cat habitat here are speedily shrinking.

There were reports of 27 fishinng cats killing in 16 months from the same study site - Shyampur, Bugnan, Amta, Bali, Domjur and Dankuni - due to conflict with locals.

According to the researcher most of the kills about 16 happened in Uluberia because the marshlands there are rapidly being converted into brick fields for supply to kolkata.

Source: Time of India

Tuesday 16 June 2015

Rain 13% above normal in INDIA

The monsoon has got off to a good start after a slightly delayed onset, with widespread showers over the past five days taking the countrywide rain tally to 13% above normal so far this month.

The surge in rain has been aided by a favourable weather system in the Indian Ocean that is expected to last another 4-5days, a senior Met official said.

The northern limit of the monsoon currently cuts through the Southern tip of Gujarat, Madhya Pradesh, Chhattisgarh, southern Odisha and eastern part of Bengal.  IMD officials expect the monsoon to cover more parts of Odisha and Bengal  and enter Bihar and Jharkhand in the next 3-4 days.

A top IMD scientist said a rain-bearing system called the Madden Julian Oscillation was passing through the Indian Ocean and had energized the Bay of Bengal arm of Monsson.

"MJO is likely to continue bringing rain for the next four days or so before it moves towards the western Pacific" he said.

Monday 8 June 2015

Research points to future test for ALS

Researchers have uncovered new insights on the genetic causes of Amyotrophic Lateral Sclerosis (ALS), which is also known as Lou Gehrig's disease. These findings could uncover a new way to detect a genetic predisposition to ALS before the disease strikes, they say. 

A common mutation associated with ALS is an unstable repeated DNA sequence within the C9orf72 gene that could reach into the thousands. However, it is unknown how many repeats would be sufficient to cause the disease. A way to predict if the number of repeats increases to the damaging range is the addition of methyl groups to the repeats. This modifies the DNA, shutting off production of C9orf72.
The study -- led by Professors Ekaterina Rogaeva and Lorne Zinman of the U of T Division of Neurology -- followed three generations of a single family. While the grandparents and parents in the family were healthy, four of five adult children possessed the repeat methylation, as a result of a damaging mutation in the C9orf72 gene responsible for ALS. Two of them have already died due to complications of ALS.
The cause of ALS is unknown in about 90 per cent of patients. The remaining 10 per cent are attributed to genes passed down through parents. Scientists have long understood that people with genetically acquired ALS have a parent with the disease. However, the study by the Rogaeva and Zinman team found that neither parent nor grandparents had ALS.
In most people, it's common for the C9orf72 gene to have less than 30 repeats. The father examined in this study had 70 unmethylated repeats, which is not sufficient to cause ALS. Yet, in his children the mutation expanded to more than 1000 repeats. While the father had an overexpression of C9orf72, the children had reduced expression of that gene. The researchers believe these factors explain how his children acquired ALS, while he remained unaffected.
"With further research, we may be able to use this information to develop a genetic test that can identify if parents are likely to pass a mutation that may cause ALS in their offspring," said Zinman, who is also an associate scientist at Sunnybrook Research Institute and a staff neurologist at Sunnybrook Health Sciences Centre.
By expanding this research to include other multi-generational families, as well as study unaffected parents, the team hopes to identify a range of C9orf72 repeats that can be used to predict a genetic predisposition to ALS in children.
"We were fortunate to have the opportunity to look at a multiple generation family," said Rogaeva, who is also a professor at the Tanz Centre for Research in Neurodegenerative Diseases. "It gave us a much more complete picture of the genetic development between each branch of the family tree."
Their research was published in June 4 issue of The American Journal of Human Genetics.
 
 
This story is taken from Science Daily

Nearly one-third of early adulthood depression could be linked to bullying in teenage years

Bullying in teenage years is strongly associated with depression later on in life, suggests new research. Depression is a major public health problem with high economic and societal costs. There is a rapid increase in depression from childhood to adulthood and one contributing factor could be bullying by peers. But the link between bullying at school and depression in adulthood is still unclear due to limitations in previous research.

Depression is a major public health problem with high economic and societal costs. There is a rapid increase in depression from childhood to adulthood and one contributing factor could be bullying by peers. But the link between bullying at school and depression in adulthood is still unclear due to limitations in previous research.
So a team of scientists, led by Lucy Bowes at the University of Oxford, carried out one of the largest studies on the association between bullying by peers in teenage years and depression in early adulthood.
They undertook a longitudinal observational study that examined the relationship between bullying at 13 years and depression at 18 years.
They analysed bullying and depression data on 3,898 participants in the Avon Longitudinal Study of Parents and Children (ALSPAC), a UK community based birth cohort.
The participants completed a self-report questionnaire at 13 years about bullying and at 18 years completed an assessment that identified individuals who met internationally agreed criteria for depressive illness.
Of the 683 teenagers who reported frequent bullying at more than once a week at 13 years, 14.8% were depressed at 18 years. And of the 1446 teenagers who had some bullying of 1-3 times over six months at 13 years, 7.1% were depressed at 18 years.
Only 5.5% of teenagers who did not experience bullying were depressed at 18 years.
Around 10.1% of frequently bullied teenagers experienced depression for more than two years, compared with 4.1% from the non-bullied group.
Overall, 2668 participants had data on bullying and depression as well as other factors that may have caused depression such as previous bullying in childhood, mental and behavioral problems, family set up and stressful life events.
When these factors were taken into account, frequently bullied teenagers still had around a twofold increase in odds of depression compared with those who did not experience bullying. This association was the same for both males and females.
The most common type of bullying was name calling -- 36% experienced this, while 23% had belongings taken.
Most teenagers never told a teacher (41%-74%) or a parent (24%-51%), but up to 75% told an adult about physical bullying such as being hit or beaten up.
If this were a causal relationship up to 30% of depression in early adulthood could be attributable to bullying in teenage years, explain the authors, adding that bullying could make a substantial contribution to the overall burden of depression.
While this is an observational study and no definitive conclusions can be drawn about cause and effect, they say that interventions to reduce bullying in schools could reduce depression in later life.
In an accompanying editorial, Maria M Ttofi from the University of Cambridge writes that this study has clear anti bullying messages that should be endorsed by parents, schools and practitioners. She also calls for more research to establish the causal links between bullying and depression, and to drive specific interventions to reduce victimisation.
 
This story is taken from Science Daily

Smart watches, apps can make life easier for ADHD children

Researchers believe that children with autism or ADHD can benefit from technologies originally developed for the elderly. Children and young people with ADHD can find it difficult to keep appointments and easy to forget what they have to bring with them in different situations. Their lives can be made easier if they use a smart watch or a calendar displayed on a mobile phone or tablet. Such aids may use a combination of pictures, sounds or text to remind them about where they have to be and when, and the things they have to do. 


"Our experience is that it takes time to set the systems up and that using them can sometimes be difficult," says researcher Ƙystein Dale. "But we can also claim that these are aids that can be of benefit to these groups," he says. Dale, together with Lisbet Grut, his colleague at SINTEF, has been looking into how smartphones, tablets, smart watches and shared calendar systems can provide support for children and their families in their everyday lives.
Wake-up lights and shared calendars
Children and young people with ADHD can find it difficult to keep appointments and easy to forget what they have to bring with them in different situations. Their lives can be made easier if they use a smart watch or a calendar displayed on a mobile phone or tablet. Such aids may use a combination of pictures, sounds or text to remind them about where they have to be and when, and the things they have to do.
Fourteen year-old Lisa is one of the ADHD children taking part in the study. She finds it difficult to get going in the mornings and organise her day-to-day activities. In order to help her first get to sleep and then get up in the mornings, Lisa tried using a wake-up light linked to an iPhone app. The system simulated sunlight and played music that gave her a gentle start to the day. She only used the wake-up light for a few weeks up until the school summer holidays, but was pleased with how it worked. Her mother agreed that the morning routine went easier when Lisa used the light.
Lisa tried out a shared calendar app to help her in her everyday activities. She got reminders about things she had to do both on her iPhone and on a smart watch connected to the phone. Her mother also got a message on her phone as soon as Lisa checked off that she had completed an activity. However, some of the services provided by the technical aids proved to be unstable. Moreover, Lisa didn't like the smart watch which she found was too big for her wrist and stopped using it.
The original set-up using a shared Google calendar was swapped for an Apple product involving a built-in task list with reminders. "This was better suited to Lisa's and her mother's needs," says Grut. "Mother entered the things that had to be done, and Lisa checked them off on the phone when she had finished them," she says.
A lot of choice
There is a huge number of technologies on the market. On the positive side, there is a lot of choice. However, the wide variety of technologies available makes it difficult to navigate the market and identify the system that works best in individual cases. It is important that systems intended to support children are not made up of too many different components. It is difficult to have to carry lots of devices around -- all of which have to be operated differently. During the testing process, the researchers also found that set-ups consisting of many interconnected components are vulnerable to technical problems. A good example is when a calendar is shared between many people involving multiple appointment reminders on both mobile phones and smart watches. It proved difficult to get such systems to function consistently well over time.
Quality of life for a vulnerable group
"We believe that our knowledge about how technology can be applied may enable children to function better in their day-to-day lives, both at school and in other social situations," says Dale. "This will contribute towards enhancing their quality of life, and that of their families," he says. "To achieve this the children and their families need effective guidance and facilitation, and close supervision by professionals over time. The positive aspect here is that these days children probably own and use tablets and similar technologies all the time, and are curious and eager to try new ones out," says Dale.
 
This story is taken from Science Daily

Research offers a new approach to improving HIV vaccines

Researchers have identified a molecule that recognizes HIV and initiates an immune response. The findings could help improve the efficacy of HIV vaccines to prevent infection, they say. 

The study shows how a protein called polyglutamine-binding protein 1 (PQBP1) acts as a front-line sensor and is critical to initiating an immune response to HIV. When the PQBP1 encounters the virus, it starts a program that triggers an overall protective environment against infection and enhances the production of virus-specific antibodies. The research, which identified PQBP1 as a target for improving HIV vaccines, was published June 4 online ahead of print in the journal Cell.
'Vaccines work by teaching the immune system to react by mimicking a natural infection,' said lead author Sunnie Yoh, Ph.D., a postdoctoral fellow in the lab of Sumit Chanda, Ph.D., director of the Immunity and Pathogenesis Program at Sanford-Burnham. 'Designing a drug that mimics the interface between HIV and PQBP1 would allow an HIV vaccine to more effectively re-create an immune environment that mirrors real infection.'
'Current approaches to HIV vaccine development have thus far yielded little fruit, partly because of the lack of an effective vaccine adjuvant. Adjuvants promote a robust immune response to vaccines and are critical to eliciting long-lasting immunity,' said Chanda. 'Our study identifies a promising new target for a vaccine adjuvant that could advance the development of HIV vaccines and prevent infection.'
How it works
Although the major target of HIV infection is CD4+ T cells, dendritic cells are one of the first cell types to encounter HIV during sexual transmission. After HIV infects cells, its DNA forms an interface with PQBP1 in sentinel dendritic cells and initiates the immune response.
Dendritic cells control the innate immune response -- a generic, non-specific defense against pathogens. These cells also activate the adaptive immune response that generates highly specific antibodies that provide protective, long-lasting immunity. Both the innate and adaptive immune systems are necessary to provide an optimal immune response to vaccines.
'PQBP1 acts as a sentry for innate immune response to HIV. The development of a highly effective HIV vaccine will likely depend on both combining the correct immunogens, which are viral proteins, and unlocking the innate response, to establish long-lived protection,' said Chanda. 'Now that we know the gatekeeper, it will be much easier to find a key.'

This story is taken from Science Daily

Online hookup sites increase HIV rates in sometimes surprising ways

The introduction of Craigslist led to an increase in HIV infection cases of 13.5 percent in Florida over a four-year period, according to a new study. The estimated medical costs for those patients will amount to $710 million over the course of their lives, research shows.

Online hookup sites have made it easier for people to have casual sex -- and also easier to transmit sexually transmitted diseases. The new study measured the magnitude of the effect of one platform on HIV infection rates in one state, and offered a detailed look at the varying effects on subpopulations by race, gender and socio-economic status. Looking at the period 2002 to 2006, it found that Craigslist led to an additional 1,149 Floridians contracting HIV.
The work, 'Matching platforms and HIV Incidence: an empirical investigation of race, gender, and socio-economic status,' is forthcoming in Management Science.
The study 'underscores the need for broader communication and dissemination of the risks posed by the type of online matching platforms studied here,' notes Ritu Agarwal, a professor at the University of Maryland's Robert H. Smith School of Business and founding director of the Center for Health Information and Decision Systems (CHIDS), and Brad N. Greenwood, a 2013 Smith School Ph.D. and assistant professor at Temple University's Fox School of Business.
The study also found that the new HIV cases came disproportionately from one racial-ethnic group, African Americans, who accounted for some 63 percent of the new cases. 'That is a bit of paradox,' says Agarwal, 'because research suggests that the African American community is one which uses the Internet the least, even though the gap is narrowing.'
Greenwood described African Americans as suffering the effects of a 'double digital divide.' He said, 'Not only have studies shown there is lower utilization of the Internet for welfare-enhancing activities, but now there's evidence of utilization for negative activities as well.'
Craigslist phased rollout a 'natural experiment'
Craigslist's arrival in different cities and different counties at different times made it possible to isolate the effects of the matching platforms; the phased rollout amounted to a 'natural experiment.' (Other matching sites, like Grindr or Tinder, have tended to become available across broad areas all at once, although neither of those platforms existed when this study was done, and Craigslist remains the largest). Agarwal and Greenwood focused on whether there was a change in HIV cases in the first full calendar quarter after Craigslist's arrival in a county or city. For patient data, the researchers drew on a census that included data on some 12 million patients; omitting institutions that had no HIV cases or which were open for only part of the period studied, there were 223 hospitals in the sample.
There was also an increase in new HIV cases among Latinos and Caucasians -- although only intermittently statistically significant and not statistically different from each other. The lack of difference between Latinos and Caucasians was notable, as Latinos have a higher baseline rate of HIV infection. One explanation could be that fewer Latinos may have sought treatment. Or Florida's Latino community, which is especially large and well-off, may not be reflective of national trends.
Women, wealthier individuals susceptible
Another counterintuitive result was that more cases came from non-Medicaid patients, the wealthier patients, than from the population covered by the government program. That was the case even though the base rate of HIV infection is higher among lower-income citizens. 'It could be the case that higher-income people face a higher social penalty for engaging in casual, quasi-anonymous sex, and that the freedom of Internet anonymity changes their behavior more than it does for the less wealthy,' Agarwal suggested. 'Or it could be a byproduct of substantially better Internet access.' (Together with the finding for African Americans, that would suggest that degree of Internet access affects different sub-populations in different ways).
HIV prevention efforts tend to focus on the highest-risk populations, such as the economically disadvantaged, but public-health officials should be aware that online platforms may be 'changing the game,' says Agarwal.
Perhaps most surprising of all, given the relatively high rates of infection among bisexual and homosexual men, there was not a statistically significant difference in HIV infection rate increases across men and women.
It could be the case that homosexual men with HIV who used Craigslist were more likely to practice safe sex than infected heterosexuals, the authors speculated. Or matching platforms may lead to more homosexual activity by men who do not identify publically as homosexuals, who then spread the virus to their female partners. The question demands more research, the authors said.
Agarwal and Greenwood were careful to note that they weren't making a statement about the overall value of Craigslist. Nevertheless, the study offers a reminder of the downside of connectivity. 'While there is a general belief that connectivity is good on average, unfortunately 'on average' means that some people are going to benefit more and others are going to lose more,' Agarwal says. 'We need to better understand both the beneficial as well as the punitive effects of the Internet on individual and public health.'

This story is taken from Science Daily

Many UK patients with gonorrhea prescribed outdated antibiotics

Many UK patients with gonorrhea are being prescribed antibiotics that are no longer recommended for treating the infection by their family doctor, reveals research published in the online journal BMJ Open. 

This failure to keep abreast of national clinical guidance is of concern, given the global threat of antibiotic resistance, say the researchers.
They base their findings on an analysis of electronic health records entered anonymously into the Clinical Practice Research Datalink-- a large database containing the health records of around 5.5 million patients registered with 680 general practices around the UK--as well as information from anonymous monitoring of sexually transmitted infections in England.
They looked particularly at how doctors in general practice had treated the two most commonly diagnosed bacterial sexually transmitted infections in England, Chlamydia and gonorrhoea, between 2000 and 2011.
GPs diagnosed an estimated 193,000 people with Chlamydia and nearly 17,000 with gonorrhoea during this period, accounting for between 9% and16% of all Chlamydia cases and between 6% and 9% of all gonorrhoea cases in England.
The number of diagnoses GPs made for Chlamydia rose substantially from 22.8/100,000 of the population in 2000 to 29.3/100,000 of the population in 2011. And the proportion of patients treated for this infection rose from around six in every 10 (60%) to almost eight out of 10 (78%).
Most (90%) were prescribed an antibiotic recommended in national clinical guidance. But this was not the case for gonorrhoea.
The number of diagnoses fluctuated between 3.2 to 2.4/100,000 of the population, while the proportion treated ranged between a third (just under 33%) and just over half (54%).
Despite being discontinued as a recommended treatment for the infection in 2005, ciprofloxacin continued to be prescribed. This antibiotic accounted for more than four out of 10 prescriptions (42%) in 2007, and one in five in 2011.
The bacterium that causes gonorrhoea, Neisseria gonorrhoeae, is adept at developing resistance to the antibiotics used to treat it, and the evidence from other research shows that over a third of gonorrhoea infections treated at sexual health clinics were resistant to ciprofloxacin, for example, while up to one in five cases may be resistant to penicillin.
The researchers conclude that GPs make an important contribution to the diagnosis and treatment of bacterial sexually transmitted infections, but while most patients with Chlamydia are treated appropriately, "significant numbers" of those infected with gonorrhoea are not.
"Treatment of infections with reduced susceptibility or resistance to the prescribed therapy may inadvertently facilitate onward transmission and risks infection complications," they write.
"Antimicrobial resistance in gonorrhoea is a global problem and may become an issue for Chlamydia in future," they warn. "Practitioners should be alert to the likelihood of revisions to national treatment guidelines and of treatment failure in their patients."

This story is taken from Science Daily

Bacterial communities of female genital tract have impact on inflammation, HIV risk

The most common bacterial community in the genital tract among healthy South African women not only is significantly different from that of women in developed countries but also leads to elevated levels of inflammatory proteins, which could increase the risk of HIV infection, new research concludes. 

"Ours is the first study to identify a specific bacterial community in the genital tract of healthy women that is highly pro-inflammatory, and we show this community is common in the women we studied in South Africa," says Douglas Kwon, MD, PhD, of the Ragon Institute and the MGH division of Infectious Diseases, senior author of the report. "We also identified specific mechanisms by which the immune system senses these bacterial species and potential mechanisms linking that response to increased HIV susceptibility."
The authors note that, although inflammatory reactions in the female genital tract can prevent or eliminate many sexually transmitted infections, activation of the immune system paradoxically increases the risk that exposure to HIV will lead to infection. In the past, the bacterial population of the female tract was believed to be very simple and -- based on what was seen in white, premenopausal women -- dominated by a single Lactobacillus species. Since mild vaginal infections that alter the dominant microbial community can increase the risk of acquiring HIV and other sexually transmitted diseases, the researchers designed the current study to investigate whether differences in the genital microbial communities of healthy women might affect overall susceptibility to infection.
Analysis of genital samples from a group of 94 young black South African women -- who were HIV negative and had no disease symptoms -- revealed that only a minority had the sort of Lactobacillus-dominant bacterial communities commonly seen in U.S. women. The researchers grouped the samples they studied into four community types -- what they called cervicotypes -- based on the dominant bacterial species. The most common cervicotype among the study participants was very diverse, with low levels of Lactobacillus and no single dominant bacterial group.
To assess levels of immune activation in the study participants, the researchers measured levels of the immune system signaling molecules called cytokines in vaginal fluid samples and found significant individual differences -- as much as 1,000-fold in some cases. Elevated cytokines were not associated with active sexually transmitted infections or with factors such as sexual frequency or the use of condoms or hormonal contraceptives. Comparing cytokine levels among the cervicotypes revealed that the low-Lactobacillus, high-diversity communities were more than four times as likely to have elevated genital inflammatory cytokines. In fact, the presence of community was a better predictor of inflammation than was the presence of sexually transmitted diseases or other vaginal infections.
The researchers found that women with the highest levels of genital inflammation also had elevated levels of CCR5+ CD4+ T cells, the cells that are infected by HIV, in their genital tracts. "It has been shown that having a higher frequency of these HIV target cells at the site of exposure increases the risk of infection," says study lead author Melis Anahtar, an MD/PhD candidate in the Harvard/MIT Division of Health Sciences and Technology. "It's possible that treatments targeting specific genital bacteria could improve the effectiveness of measures -- such as antiretroviral vaginal gels -- designed to prevent HIV infection. In addition, finding that women with elevated genital inflammation may be three times more likely to become HIV-infected suggests that generally targeting the genital microbial population may further reduce risk."
An assistant professor of Medicine at Harvard Medical School, Kwon adds, "Understanding the impact of differences in the genital microbial population could also have implications for pregnant women and their infants. Some of the pro-inflammatory species that we found in our study were originally found in infected amniotic fluid and may contribute to the risk for premature birth and other complications of pregnancy." The research team is now investigating the specific mechanisms by which the immune system senses the presence of specific bacterial species in the female genital tract as well as examining the potential role of the broader microbial population, including viruses and fungi.

This story is taken from Science Daily

Study findings linking ovulation, racial bias questioned

Is ovulation related to higher racial bias? Despite previous studies, researchers have been unable to find any evidence that there is an increase in racial bias related to conception risk. 

In four studies, documented in their paper "In Search of an Association Between Conception Risk and Prejudice," Carlee Beth Hawkins, a doctoral student, and her co-authors were unable to find any evidence that there is an increase in racial bias related to conception risk.
Hawkins, along with Cailey Fitzgerald of the University of Virginia and Brian Nosek of the University of Virginia and the Center for Open Science, closely followed the study procedures in "Race Bias Tracks Conception Risk Across the Menstrual Cycle," published in the journal Psychological Science, but were unable to come to the same conclusions. They also sought to expand beyond racial bias toward other social groups.
"The theoretical explanation for the findings was that women with higher conception risk and therefore at higher risk of unwanted pregnancy resulting from sexual coercion, are more negative toward racial outgroups because outgroup men are more threatening and therefore more likely to be sexually coercive," Hawkins says. "This logic shouldn't hold for outgroups that aren't likely to be sexually coercive, so we shouldn't see this pattern -- or it should be reduced -- when examining attitudes toward elderly men, physically disabled men, and gay men, for example."
Being unable to replicate the original findings, though halted further studies.
"Perhaps the effect is smaller than originally proposed, so small that we couldn't find it again," Hawkins says. "Or, perhaps the effect doesn't replicate in samples or contexts outside the ones originally tested. Either way, this is useful information for this area of research."
The hope is that researchers build off of both sets of research to better understand how physiological processes may shape psychological responses or processes, and improve the way they study this subject, either through larger samples, or more diverse samples.
 
This story is taken from Science Daily

Health, social inequities drives HIV in young men who have sex with other men

Researchers sought to identify the factors associated with incident HIV infection among a cohort of racially/ethnically and socioeconomically diverse young, gay, bisexual and other men who have sex with men. Socioeconomic status is key driver of HIV seroconversion, they concluded. 

Their paper, "Incidence of HIV infection in Young Gay, Bisexual, and other YMSM: The P18 Cohort Study," published in the Journal of Acquired Immune Deficiency Syndromes (JAIDS), reports on data collected from 600 YMSM between the ages of 18 and 19 enrolled in the P18 Cohort. These participants were followed over a three-year period and received HIV testing and counseling as part of the study.
Over the study period, the cumulative incidence of HIV was 7.2% and HIV seroconversion was associated with perceived SES and race/ethnicity. HIV seroconversions were lower among White YMSM, compared with their Black and Hispanic/Latino counterparts. Also, HIV seroconversions were more likely among those who self-reported a perceived lower and middle/average SES (49% and 40%, respectively), compared to those who reported a higher perceived SES (12%).
"The data from our P18 Cohort Study demonstrate the social and structural inequities that continue to drive racial/ethnic disparities in HIV infections," said Perry N. Halkitis and Farzana Kapadia, the study investigators. "Assumptions about differences in sexual behavior along racial lines are fueling stereotypes and these stereotypes are detrimental to prevention efforts. We find that young Black men are not engaging in more sexual activity but experience more structural and social inequities than their White peers."
"In fact, our study findings show that socioeconomic status (SES) is key driver of HIV seroconversion; individuals who reported a lower perceived SES were more likely to seroconvert over the course of the study period. Moreover, in our cohort study, Black YMSM were more likely to be of lower SES and were also more likely to seroconvert," said Halkitis and Kapadia.
The confluence of these factors is particularly problematic as low SES individuals are more likely to reside in neighborhoods with higher levels of poverty, environments associated with lower access to effective health services, and higher level of untreated sexually transmitted infections (STIs) including HIV, conditions which have been shown to be inextricably connected to each other and also linked to increased risk for HIV acquisition and transmission. In the study residing in a high HIV prevalence neighborhood was associated with seroconversion.
In addition, younger average age at sexual debut with another man was also associated with a greater likelihood of HIV seroconversion. Specifically, YMSM who initiated sex with another man at or after the age of 14 were substantially less likely to seroconvert. This suggests that access to comprehensive sexual education programs that include components on sexuality education are warranted to bolster HIV prevention programming among adolescent and emerging adult YMSM.
"Taken together, these findings provide further evidence for the existence of significant racial/ethnic and SES related disparities in HIV incidence among YMSM. In addition, these findings suggest that for sexual minority men, effective HIV prevention programs will need to attend to not only behavioral factors, such as age of sexual debut, but also structural and social conditions that continue to place this new generation of YMSM at heightened risk for acquiring HIV," said Halkitis and Kapadia.
Future studies are needed to understand the relative contributions of economic, psychosocial, and structural factors that perpetuate racial/ethnic disparities in HIV incidence. Such information will aid in the strategic scale-up of existing interventions and the development of new ones aimed at addressing these inequities at multiple levels.

This story  is taken from Science Daily

Text messages can help boost teen birth control compliance

Sending teen girls periodic text messages reminding them to follow through on their clinic appointments for periodic birth control injections can go a long way toward improving timing and adherence to contraception in an age group that is notoriously noncompliant, according to a small study.

"Our findings suggest that text messaging can help overcome some issues that teens struggle with and pose challenges for the clinicians caring for them, such as keeping clinical appointments, adhering to a tight treatment schedule and regularly taking prescription medications," says study senior investigator and adolescent health expert Maria Trent, M.D., M.P.H. "Results of our study support the notion that clinicians caring for teens should consider capitalizing on this mode of communication for their outreach."
Results of the research, published online May 19 in the Journal of Adolescent Health, overall highlight the largely untapped potential of texting as a means of routine communication between clinicians and teen patients, the team says.
Cell phone use among teens and young adults -- even those from low-income communities -- is ubiquitous, the researchers note and it represents a "low-hanging fruit" opportunity to reach patients directly, bypassing traditional mail and phone call reminders.
The study was conducted among 100 Baltimore girls and young women, ages 13 to 21, receiving contraception via injection every three months and followed over nine months. Each injection provides contraception for three months.
One-half of the patients received standard automated calls on their home phones reminding them of their upcoming appointment, while the other half received personalized daily text messages starting three days prior to their monthly appointment, asking them to text back their responses. In addition, the mobile phone group also received periodic texts with tips on condom use to prevent sexually transmitted infections, suggestions for maintaining healthy weight and messages urging them to call their nurse with any questions or concerns.
Overall, 87 percent showed up for the first of three injections, 77 percent completed the second cycle, and 69 percent came to clinic for the third and final injection. Because all participants received personal phone calls from a nurse, the study was not equipped to measure differences in show-up rates between those who received standard phone call reminders and those who got text messages.
However, teens who received text-message reminders were more likely to show up for their injections on time than their peers who got traditional reminders -- 68 percent compared with 56 percent for first appointment and 68 percent compared with 62 percent for second appointments. The differences between the two groups, however, dissipated by the third appointment.
Physicians say the timing of injections is critical to how well they work, with protection dwindling if injections are spaced too far apart.
"When teens show up for their follow-up injections is just as important as whether they show up," Trent says.
Trent says that from a public-health point of view, access to effective long-acting contraception is critical to reducing teen pregnancies. Monthly contraceptive injections are one means to do so.

This story is taken from Science Daily

Sexual orientation, gender identity linked to eating disorders

Transgender and non-transgender lesbian, gay and bisexual students are at greater risk for eating disorders, finds a new study. The study used data from the American College Health Association–National College Health Assessment, a survey of 289,024 students from 223 U.S. universities. Researchers found that the rates of self-reported eating disorders were highest in transgender people. Heterosexual men had the lowest rates. 

he study used data from the American College Health Association-National College Health Assessment (ACHA-NCHA), a survey of 289,024 students from 223 U.S. universities. Researchers found that the rates of self-reported eating disorders were highest in transgender people. Heterosexual men had the lowest rates.
"Transgender people were more likely to report a diagnosis of an eating disorder -- bulimia nervosa or anorexia nervosa -- in the past year," said senior author Alexis Duncan, PhD, assistant professor at the Brown School. "They also reported using vomiting, laxatives or diet pills more for weight control in the past 30 days than cisgender men and women, regardless of their sexual orientation."
The ACHA-NCHA survey, the authors wrote in the study, "includes the largest number of transgender participants ever to be surveyed about eating disorders and compensatory behaviors, thus enabling us to conduct statistically powerful analyses of the relationship between gender identity, sexual orientation and eating-related pathology."
The results were published in the Journal of Adolescent Health in April. Elizabeth W. Diemer, who graduated in 2014 with a bachelor's degree in psychology in Arts & Sciences, was first author on the study.
The students self-reported their mental health, substance use, sexual behavior and nutrition history on questionnaires distributed between 2008-2011.
Of the ACHA-NCHA survey data, 268,066 students self identified as heterosexual, 5,057 as unsure, 15,422 as bisexual, lesbian or gay, and 479 as transgender.
Transgender students were found to have significantly greater odds of past-year eating disorder diagnosis, past-month diet pill use and past-month vomiting or laxative use compared to cisgender heterosexual women.
Transgender participants also were significantly more likely than members of any other group, including cisgender sexual minorities, to report past-year eating disorder diagnosis and past-month compensatory behaviors.
"I don't think that this is particularly surprising to the LGBTQ community and/or to clinicians that work with members of this community," Duncan said. "There is a lot of anecdotal evidence of eating disorders among transgender people; however, there have been few previous studies that have compared transgender people to cisgender people, and to our knowledge, no single previous study has compared transgender people to both cisgender heterosexual and sexual minority individuals."

This story is taken from Science Daily

Viagra to prevent transmission of the malaria parasite?

By increasing the stiffness of erythrocytes infected by the causal agent of malaria, Viagra favors their elimination from the blood circulation and may therefore reduce transmission of the parasite from humans to mosquitoes. This astonishing discovery could lead to a treatment to reduce the spread of malaria within a population. 

Plasmodium falciparum, the parasite that causes malaria, has a complex developmental cycle that is partially completed in humans and partially in the anopheline mosquito. Treatments for malaria target the asexual forms of this parasite that cause symptoms, but not the sexual forms transmitted from a human to a mosquito when it bites. Eradication of this disease thus necessitates the development of new types of treatments against sexual forms of the parasite in order to block transmission and thus prevent dissemination of the disease within the population.
The sexual forms of the parasite develop in human erythrocytes sequestered in the bone marrow before they are released into the blood. They are then accessible to mosquitoes, which can ingest them when they bite (see the top of the image on page 2). But circulating erythrocytes -- whether they are gametocyte-infected or not -- are deformable, thus preventing their clearance via the spleen, which constantly filters the blood and only retains stiff, old or abnormal erythrocytes. However, gametocyte-infected erythrocytes can easily pass through the spleen and persist for several days in the blood circulation.
During a new study, the scientists thus sought to stiffen the infected erythrocytes. They showed that the deformability of gametocyte-infected erythrocytes is regulated by a signaling pathway that involves cAMP. When the cAMP molecules accumulate, the erythrocyte becomes stiffer. cAMP is degraded by the enzyme phosphodiesterase, whose action thus promotes erythrocyte deformability.
Using an in vitro model reproducing filtration by the spleen, the scientists were able to identify several pharmacological agents that inhibit phosophodiesterases and can therefore increase the stiffness of infected erythrocytes. One of these agents is sildenafil citrate, better known under its brand name of Viagra. The authors showed that this agent, used at a standard dose, had the potential to increase the stiffness of sexual forms of the parasite and thus favor the elimination of infected erythrocytes by the spleen.
This discovery could help find new ways to stop the spread of malaria in a population. Modifying the active substance in Viagra to block its erectile effect, or testing similar agents devoid of this adverse effect, could indeed result in a treatment to prevent transmission of the parasite from humans to mosquitoes.

This story is taken from Science Daily

Female cystic fibrosis patients need more contraceptive guidance, study finds

Only half of women with cystic fibrosis report using contraception and frequently apt to become pregnant unintentionally, according to a new study. As recently as the 1960s, children with cystic fibrosis -- an inherited disease that causes thick, sticky mucus to form in the lungs, pancreas, and other organs -- often died before attending elementary school. Today many people with the disease live into their 30s, 40s and beyond. 
"As the median age of survival for women with cystic fibrosis rises, reproductive health is becoming increasingly important in this population," said lead author Andrea H. Roe, MD, an OB/GYN resident at the Hospital of the University of Pennsylvania. "While this once was not an issue, what we found is that participants in our study are sexually active, but contraceptive use is inadequate."
The researchers used a survey to assess reproductive health and quality of life in patients with cystic fibrosis. Female participants aged 18 to 45 years were recruited through the electronic mailing list of the Penn Adult Cystic Fibrosis Program. Among 53 women surveyed, 83 percent reported being sexually active and 27 percent said they had been pregnant. Twenty-two percent of reported pregnancies were terminated, due to either unplanned pregnancy or suboptimal health status. Forty-nine percent of participants said they use contraception, compared to 65 percent of women in the same general U.S. population. Furthermore, women with more severe CF disease were revealed to be less likely to use contraception. Condoms and oral contraceptive pills were the most commonly used methods.
"With less than half reporting that they use contraception, there is clearly a significant unmet need for contraception in this population," said senior author Courtney A. Schreiber, MD, MPH, an associate professor of Obstetrics and Gynecology at Penn. "Participants said they prioritize effectiveness and ease of use in their contraceptive method. They also want to avoid side effects and diminished sexual enjoyment. It's important that physicians working with this population discuss these matters with them so that women with CF can avoid unintended pregnancy, especially in the context of a heritable disease that may be exacerbated by pregnancy. Pregnancy planning is important in the population."
 
This story is taken from Science Daily

New tropical tree species await discovery

Scientists have raised the estimated number of tropical tree species to at least 40,000 to 53,000. Many tropical tree species risk extinction because of their rarity and restriction to small geographic areas, reaffirming the need for comprehensive, pan-tropical conservation efforts. 

Although scientists could confidently say 'the tropics are diverse,' the answer to 'how diverse' still remains open to speculation. Tropical tree identification is notoriously difficult -- hampered by hard-to-access terrain and the sheer number of rare species. Much of the data came from CTFS-ForestGEO study sites, where standardized pan-tropical survey methods create opportunities to much more accurately guage tropical diversity. By raising the estimated minimum number of tree species in the world, estimates for the number of insect and microbe species associated with tropical trees also increases, placing an even higher premium on protection of these forest ecosystems.
Co-author William Laurance, senior research associate at STRI and distinguished research professor at James Cook University, explains that the 'stunningly high tree diversity' of the tropics is represented by thousands of rare species, whose sparse populations may not be sustained in the long term by isolated protected areas. This study once again validates a strategy of making forest reserves as big as possible, and also trying to prevent their isolation from adjoining areas of forest.'
The study's lead author Ferry Slik, professor at Universiti Brunei Darussalam, collaborated with over 170 scientists from 126 institutions to study a dataset composed of 207 forested locations across tropical America, Africa and the Indo-Pacific. Each forest plot contains at least 250 individual trees identified to species, ensuring comprehensive coverage of the total species diversity in each geographical area. Among their findings, the researchers note that, contrary to previous assumptions, the Indo-Pacific tropics contain as much species diversity as tropical America -- at least 19,000 species. Both tropical America and the Indo-Pacific are about five times as species-rich as Africa, whose forests are hypothesized to have experienced extensive extinction events during the Pleistocene era of glaciation and climate change. All three regions contain distinct tree lineages reflecting unique evolutionary histories.
Researchers note that their calculations excluded some 10 percent of unidentifiable trees in a dataset comprising 657,630 individuals. Since these trees could reasonably represent rare or previously unknown species, there's a high likelihood that the world's estimates of total tree species diversity will keep increasing as more of the tropics are surveyed and studied. Laurance notes that the CTFS-ForestGEO network continues to grow, adding new forest plots not just for basic research but also, 'as barometers of the long-term effects of global change on forest communities.'
Meanwhile, as deforestation and development increase the extinction risk for many unique species, lessons may be learned from Africa's reduced tropical diversity. When forest areas shrink, rare species are usually the first to disappear. Consequently, even if the extinction pressure is eventually lifted, a much more limited palette of species remains to repopulate the region. While the tropics are vast and diverse, their individual components are irreplaceable.

This story is taken from Science Daily